Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | C8N25_10343 | Not Available | Negative | 1064818 - 1065294 | 17044.3 |
| tetratricopeptide repeat protein | C8N25_10344 | Not Available | Negative | 1065379 - 1066092 | 26460.1 |
| pyruvate dehydrogenase e1 component alpha subunit | C8N25_10345 | Not Available | Negative | 1066207 - 1067226 | 37845.2 |
| dna replication and repair protein recf | C8N25_10346 | Not Available | Positive | 1067319 - 1068431 | 42163.1 |
| hypothetical protein | C8N25_10347 | Not Available | Positive | 1068580 - 1068807 | 8096.84 |
| uncharacterized protein duf4221 | C8N25_10348 | Not Available | Positive | 1068875 - 1070074 | 46067.5 |
| hypothetical protein | C8N25_10349 | Not Available | Positive | 1070031 - 1070399 | 14182.0 |
| hth-type transcriptional regulator/antitoxin higa | C8N25_10350 | Not Available | Negative | 1070513 - 1070872 | 13619.6 |
| mrna interferase higb | C8N25_10351 | Not Available | Negative | 1070850 - 1071167 | 12488.1 |
| nucleotidyltransferase-like protein | C8N25_10352 | Not Available | Negative | 1071289 - 1072194 | 33315.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
