Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase-4 subunit a | C8N25_10165 | Not Available | Positive | 66663 - 69287 | 98909.3 |
| trna (guanosine-2'-o-)-methyltransferase | C8N25_10166 | Not Available | Positive | 69305 - 70009 | 26947.2 |
| hypothetical protein | C8N25_10167 | Not Available | Negative | 70006 - 70611 | 22673.5 |
| hypothetical protein | C8N25_10168 | Not Available | Positive | 70756 - 71271 | 19117.8 |
| hypothetical protein | C8N25_10169 | Not Available | Positive | 71272 - 72312 | 39052.5 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | C8N25_10170 | Not Available | Negative | 72367 - 72804 | 15962.0 |
| phosphoenolpyruvate carboxykinase (atp) | C8N25_10171 | Not Available | Negative | 73065 - 74663 | 59189.4 |
| pot family proton-dependent oligopeptide transporter | C8N25_10172 | Not Available | Positive | 74947 - 76509 | 55872.8 |
| tetr family transcriptional regulator | C8N25_10173 | Not Available | Negative | 76588 - 77283 | 26468.4 |
| tyrosyl-trna synthetase | C8N25_10174 | Not Available | Negative | 77433 - 78725 | 47997.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
