Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase beta subunit | C8N25_102275 | Not Available | Positive | 964026 - 965240 | 43100.8 |
| Trna-arg | Not Available | Not Available | Positive | 965281 - 965357 | Not Available |
| vcbs repeat protein | C8N25_102277 | Not Available | Negative | 965776 - 969078 | 122998.0 |
| putative outer membrane starch-binding protein | C8N25_102278 | Not Available | Negative | 969332 - 970873 | 57085.9 |
| tonb-linked susc/raga family outer membrane protein | C8N25_102279 | Not Available | Negative | 970892 - 974404 | 128728.0 |
| fecr family protein | C8N25_102280 | Not Available | Negative | 974554 - 975603 | 40749.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | C8N25_102281 | Not Available | Negative | 975608 - 976240 | 24626.6 |
| vcbs repeat protein | C8N25_102282 | Not Available | Negative | 976584 - 978113 | 57647.4 |
| parallel beta helix pectate lyase-like protein | C8N25_102283 | Not Available | Positive | 978626 - 980005 | 51423.6 |
| mannan endo-1,4-beta-mannosidase | C8N25_102284 | Not Available | Negative | 980011 - 981093 | 40696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
