Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensin subunit smc | C8N25_102175 | Not Available | Positive | 834325 - 837864 | 135918.0 |
| transposase is200 family protein | C8N25_102176 | Not Available | Positive | 838485 - 838730 | 10094.0 |
| kila domain-containing protein | C8N25_102177 | Not Available | Positive | 838980 - 839273 | 11002.0 |
| hypothetical protein | C8N25_102178 | Not Available | Positive | 839651 - 839911 | 10009.1 |
| putative atp-grasp superfamily atp-dependent carboligase | C8N25_102179 | Not Available | Positive | 840545 - 841672 | 43174.2 |
| cubico group peptidase (beta-lactamase class c family) | C8N25_102180 | Not Available | Positive | 842270 - 843682 | 53635.5 |
| uncharacterized protein duf421 | C8N25_102181 | Not Available | Positive | 844105 - 844635 | 19638.3 |
| endonuclease/exonuclease/phosphatase (eep) superfamily protein yafd | C8N25_102182 | Not Available | Positive | 844632 - 845627 | 38100.7 |
| hypothetical protein | C8N25_102183 | Not Available | Positive | 845704 - 845814 | 4095.93 |
| hypothetical protein | C8N25_102184 | Not Available | Positive | 845899 - 846309 | 15638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
