Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | C8N25_10242 | Not Available | Negative | 689549 - 692707 | 114962.0 |
| rnd family efflux transporter mfp subunit | C8N25_10243 | Not Available | Negative | 692711 - 693763 | 38841.0 |
| outer membrane protein tolc | C8N25_10244 | Not Available | Negative | 693884 - 695251 | 51792.8 |
| dna-binding transcriptional regulator gbsr (marr family) | C8N25_10245 | Not Available | Negative | 695324 - 695785 | 17955.6 |
| arac family transcriptional regulator | C8N25_10246 | Not Available | Positive | 695998 - 696561 | 21371.9 |
| parallel beta-helix repeat protein | C8N25_10247 | Not Available | Positive | 697537 - 701595 | 147608.0 |
| hypothetical protein | C8N25_10248 | Not Available | Negative | 701638 - 701931 | 11183.8 |
| uncharacterized protein duf1080 | C8N25_10249 | Not Available | Positive | 702156 - 703943 | 63849.9 |
| cytochrome c551/c552 | C8N25_10250 | Not Available | Positive | 703962 - 705890 | 70272.0 |
| hypothetical protein | C8N25_10251 | Not Available | Positive | 705869 - 706114 | 9852.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
