Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in gliding motility epsb | C8N25_1022 | Not Available | Negative | 647561 - 650008 | 91662.8 |
| protein involved in gliding motility epsa | C8N25_1023 | Not Available | Negative | 650015 - 650824 | 30481.1 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | C8N25_1024 | Not Available | Negative | 651100 - 651822 | 27454.8 |
| capsular exopolysaccharide synthesis family protein | C8N25_1025 | Not Available | Negative | 651946 - 654405 | 94064.0 |
| protein involved in gliding motility epsa | C8N25_1026 | Not Available | Negative | 654411 - 655220 | 29756.7 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | C8N25_1027 | Not Available | Positive | 655417 - 656409 | 37545.3 |
| uncharacterized membrane protein ygdd (tmem256/duf423 family) | C8N25_1028 | Not Available | Positive | 656917 - 657303 | 13687.1 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | C8N25_1029 | Not Available | Positive | 657300 - 658592 | 50011.2 |
| trna pseudouridine synthase c | C8N25_10210 | Not Available | Positive | 658915 - 659625 | 27293.9 |
| zn-dependent m28 family amino/carboxypeptidase | C8N25_10211 | Not Available | Positive | 659821 - 661296 | 53061.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
