Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase subunit of abc transporter with duplicated atpase domains | C8N25_101540 | Not Available | Positive | 632305 - 633924 | 60879.7 |
| sss family transporter | C8N25_101541 | Not Available | Positive | 633962 - 635332 | 49154.4 |
| 23s rrna (cytosine1962-c5)-methyltransferase | C8N25_101542 | Not Available | Positive | 635319 - 636500 | 43953.8 |
| hypothetical protein | C8N25_101543 | Not Available | Positive | 636707 - 637141 | 15926.4 |
| hypothetical protein | C8N25_101544 | Not Available | Negative | 637964 - 639541 | 57767.4 |
| flaa1/epsc-like ndp-sugar epimerase | C8N25_101545 | Not Available | Negative | 639892 - 641802 | 71451.7 |
| lipopolysaccharide/colanic/teichoic acid biosynthesis glycosyltransferase | C8N25_101546 | Not Available | Negative | 642485 - 643099 | 23238.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | C8N25_101547 | Not Available | Negative | 643100 - 644239 | 42116.0 |
| putative colanic acid biosynthesis udp-glucose lipid carrier transferase | C8N25_101548 | Not Available | Positive | 644959 - 645669 | 27208.0 |
| hypothetical protein | C8N25_1021 | Not Available | Positive | 645919 - 646043 | 4493.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
