Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system permease protein | C8N25_101470 | Not Available | Negative | 556579 - 557796 | 45834.4 |
| uncharacterized protein ybbc (duf1343 family) | C8N25_101471 | Not Available | Positive | 557836 - 559023 | 44246.4 |
| methionyl-trna formyltransferase | C8N25_101472 | Not Available | Positive | 559084 - 560010 | 34641.9 |
| uncharacterized protein duf4412 | C8N25_101473 | Not Available | Positive | 560107 - 561033 | 34819.0 |
| dihydrofolate reductase | C8N25_101474 | Not Available | Positive | 561098 - 561607 | 19810.5 |
| short-subunit dehydrogenase | C8N25_101475 | Not Available | Positive | 561600 - 562385 | 28801.9 |
| competence/damage-inducible protein cina | C8N25_101476 | Not Available | Positive | 562505 - 563755 | 45778.7 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | C8N25_101477 | Not Available | Positive | 563851 - 565143 | 46609.2 |
| pas domain-containing protein | C8N25_101478 | Not Available | Negative | 565282 - 568149 | 108140.0 |
| hypothetical protein | C8N25_101479 | Not Available | Negative | 568149 - 569156 | 38420.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
