Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | C8N25_101450 | Not Available | Negative | 534851 - 535948 | 40911.5 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | C8N25_101451 | Not Available | Negative | 535965 - 537425 | 54043.9 |
| alanyl-trna synthetase | C8N25_101452 | Not Available | Negative | 537447 - 540071 | 98246.5 |
| d-serine deaminase-like pyridoxal phosphate-dependent protein | C8N25_101453 | Not Available | Positive | 540488 - 541594 | 40828.4 |
| nudix-type nucleoside diphosphatase (yffh/adpp family) | C8N25_101454 | Not Available | Positive | 541799 - 542377 | 22072.5 |
| uncharacterized protein yndb with ahsa1/start domain | C8N25_101455 | Not Available | Positive | 542766 - 543260 | 18995.4 |
| putative membrane protein duf2306 | C8N25_101456 | Not Available | Positive | 543317 - 543994 | 26017.3 |
| magnesium transporter | C8N25_101457 | Not Available | Positive | 544000 - 544953 | 37424.3 |
| hypothetical protein | C8N25_101458 | Not Available | Negative | 545202 - 545789 | 21473.8 |
| amp-activated protein kinase-like protein | C8N25_101459 | Not Available | Positive | 546443 - 546928 | 17600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
