Algoriphagus antarcticus str. DSM 15986

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus antarcticus strain DSM 15986 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 16.0 °C and requires aerobic conditions for its metabolism. This psychrotolerant organism is adapted to cold environments, which aligns with its designation reflecting Antarctic origins. The Gram-negative cell wall structure suggests the presence of an outer membrane, which may confer specific advantages in its native habitat, such as resistance to certain environmental stresses. The aerobic nature of A. antarcticus indicates its reliance on oxygen for energy production, potentially involving respiratory pathways that are efficient at lower temperatures. This trait may enable it to occupy niche environments where oxygen is available, but temperatures remain significantly below the optimal growth conditions for many other microbial species. Research into the metabolic capabilities of A. antarcticus could reveal insights into its ecological role in Antarctic ecosystems, particularly in nutrient cycling and interactions with other microorganisms. Understanding the adaptive mechanisms of such cold-adapted microbes might also contribute to broader knowledge regarding microbial life in extreme environments, including their potential applications in biotechnology or bioremediation in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus antarcticus
StrainDSM 15986

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmicrobial mats in Antarctic lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus antarcticus strain DSM 15986 Ga0196854_179, whole

Gene Summary

Adenine Count

1757509 bp

Thymine Count

1772544 bp

Guanine Count

1208394 bp

Cytosine Count

1182642 bp

Genome Length

5923881 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
7tm protein involved in diverse intracellular signalingC8N25_101440Not AvailableNegative522383 - 52390659403.2
lyttr family two component transcriptional regulatorC8N25_101441Not AvailableNegative523910 - 52462927241.1
ligand-binding sensor domain-containing proteinC8N25_101442Not AvailablePositive524880 - 528875153009.0
dtdp-glucose 4,6-dehydrataseC8N25_101443Not AvailableNegative528925 - 52998039710.7
udp-glucuronate 4-epimeraseC8N25_101444Not AvailableNegative530071 - 53112339216.9
glycosyltransferase involved in cell wall biosynthesisC8N25_101445Not AvailableNegative531162 - 53234644006.1
putative transcriptional regulatorC8N25_101446Not AvailableNegative532492 - 5326927379.86
hypothetical proteinC8N25_101447Not AvailableNegative532689 - 53314117756.1
hypothetical proteinC8N25_101448Not AvailableNegative533154 - 53357616158.9
pyrroline-5-carboxylate reductaseC8N25_101449Not AvailablePositive533715 - 53456330141.0

Displaying genes 451 – 460 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.