Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese/zinc/iron transport system substrate-binding protein | C8N25_101386 | Not Available | Positive | 446030 - 446944 | 33518.4 |
| manganese/zinc/iron transport system atp- binding protein | C8N25_101387 | Not Available | Positive | 446941 - 447729 | 29152.7 |
| manganese/zinc/iron transport system permease protein | C8N25_101388 | Not Available | Positive | 447729 - 449021 | 47606.6 |
| manganese/zinc/iron transport system permease protein | C8N25_101389 | Not Available | Positive | 449011 - 449907 | 31887.3 |
| thioredoxin-related protein | C8N25_101390 | Not Available | Positive | 449919 - 450371 | 17050.8 |
| trna modification gtpase trme | C8N25_101391 | Not Available | Positive | 450368 - 451750 | 51087.2 |
| fic/doc family protein | C8N25_101392 | Not Available | Positive | 451827 - 452624 | 30236.2 |
| beta-lactamase | C8N25_101393 | Not Available | Negative | 453441 - 453806 | 13953.5 |
| antitoxin phd_yefm of type ii toxin-antitoxin system | C8N25_101394 | Not Available | Positive | 454020 - 454271 | 9804.8 |
| toxin yoeb | C8N25_101395 | Not Available | Positive | 454268 - 454489 | 8577.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
