Algoriphagus antarcticus str. DSM 15986

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus antarcticus strain DSM 15986 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 16.0 °C and requires aerobic conditions for its metabolism. This psychrotolerant organism is adapted to cold environments, which aligns with its designation reflecting Antarctic origins. The Gram-negative cell wall structure suggests the presence of an outer membrane, which may confer specific advantages in its native habitat, such as resistance to certain environmental stresses. The aerobic nature of A. antarcticus indicates its reliance on oxygen for energy production, potentially involving respiratory pathways that are efficient at lower temperatures. This trait may enable it to occupy niche environments where oxygen is available, but temperatures remain significantly below the optimal growth conditions for many other microbial species. Research into the metabolic capabilities of A. antarcticus could reveal insights into its ecological role in Antarctic ecosystems, particularly in nutrient cycling and interactions with other microorganisms. Understanding the adaptive mechanisms of such cold-adapted microbes might also contribute to broader knowledge regarding microbial life in extreme environments, including their potential applications in biotechnology or bioremediation in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus antarcticus
StrainDSM 15986

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmicrobial mats in Antarctic lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus antarcticus strain DSM 15986 Ga0196854_179, whole

Gene Summary

Adenine Count

1757509 bp

Thymine Count

1772544 bp

Guanine Count

1208394 bp

Cytosine Count

1182642 bp

Genome Length

5923881 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l35pC8N25_101366Not AvailableNegative424400 - 4245947271.21
translation initiation factor 3 (bif-3)C8N25_101367Not AvailableNegative424620 - 42517421223.1
ser-trna(thr) hydrolase /threonyl-trna synthetaseC8N25_101368Not AvailableNegative425262 - 42720873593.6
hypothetical proteinC8N25_101369Not AvailableNegative427778 - 4280209180.15
hypothetical proteinC8N25_101370Not AvailableNegative428232 - 42879220904.2
hypothetical proteinC8N25_101371Not AvailableNegative428832 - 42939521022.1
putative secreted protein (por secretion system target)C8N25_101372Not AvailableNegative429440 - 43076247947.3
carboxypeptidase-like proteinC8N25_101373Not AvailableNegative430866 - 43334394665.8
l-2-hydroxyglutarate oxidaseC8N25_101374Not AvailablePositive433509 - 43471144056.4
glutamate synthase domain-containing protein 2C8N25_101375Not AvailableNegative434859 - 43637655425.8

Displaying genes 381 – 390 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.