Algoriphagus antarcticus str. DSM 15986

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus antarcticus strain DSM 15986 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 16.0 °C and requires aerobic conditions for its metabolism. This psychrotolerant organism is adapted to cold environments, which aligns with its designation reflecting Antarctic origins. The Gram-negative cell wall structure suggests the presence of an outer membrane, which may confer specific advantages in its native habitat, such as resistance to certain environmental stresses. The aerobic nature of A. antarcticus indicates its reliance on oxygen for energy production, potentially involving respiratory pathways that are efficient at lower temperatures. This trait may enable it to occupy niche environments where oxygen is available, but temperatures remain significantly below the optimal growth conditions for many other microbial species. Research into the metabolic capabilities of A. antarcticus could reveal insights into its ecological role in Antarctic ecosystems, particularly in nutrient cycling and interactions with other microorganisms. Understanding the adaptive mechanisms of such cold-adapted microbes might also contribute to broader knowledge regarding microbial life in extreme environments, including their potential applications in biotechnology or bioremediation in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus antarcticus
StrainDSM 15986

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmicrobial mats in Antarctic lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus antarcticus strain DSM 15986 Ga0196854_179, whole

Gene Summary

Adenine Count

1757509 bp

Thymine Count

1772544 bp

Guanine Count

1208394 bp

Cytosine Count

1182642 bp

Genome Length

5923881 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s15pC8N25_101356Not AvailableNegative413722 - 41399710625.0
lipopolysaccharide export system permease proteinC8N25_101357Not AvailableNegative414058 - 41584567502.0
uncharacterized protein yndb with ahsa1/start domainC8N25_101358Not AvailableNegative415917 - 41631215388.8
Trna-metNot AvailableNot AvailablePositive416614 - 416687Not Available
hypothetical proteinC8N25_101360Not AvailablePositive416704 - 41699111178.6
glycosyl hydrolase family 63C8N25_101361Not AvailableNegative416934 - 419573101942.0
glucose 1-dehydrogenaseC8N25_101362Not AvailableNegative419588 - 42043030482.7
mn2+/fe2+ nramp family transporterC8N25_101363Not AvailablePositive420824 - 42214047830.3
collagenase-like protein with putative collagen-binding domainC8N25_101364Not AvailableNegative422171 - 42380262229.9
lsu ribosomal protein l20pC8N25_101365Not AvailableNegative423947 - 42429113080.1

Displaying genes 371 – 380 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.