Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s15p | C8N25_101356 | Not Available | Negative | 413722 - 413997 | 10625.0 |
| lipopolysaccharide export system permease protein | C8N25_101357 | Not Available | Negative | 414058 - 415845 | 67502.0 |
| uncharacterized protein yndb with ahsa1/start domain | C8N25_101358 | Not Available | Negative | 415917 - 416312 | 15388.8 |
| Trna-met | Not Available | Not Available | Positive | 416614 - 416687 | Not Available |
| hypothetical protein | C8N25_101360 | Not Available | Positive | 416704 - 416991 | 11178.6 |
| glycosyl hydrolase family 63 | C8N25_101361 | Not Available | Negative | 416934 - 419573 | 101942.0 |
| glucose 1-dehydrogenase | C8N25_101362 | Not Available | Negative | 419588 - 420430 | 30482.7 |
| mn2+/fe2+ nramp family transporter | C8N25_101363 | Not Available | Positive | 420824 - 422140 | 47830.3 |
| collagenase-like protein with putative collagen-binding domain | C8N25_101364 | Not Available | Negative | 422171 - 423802 | 62229.9 |
| lsu ribosomal protein l20p | C8N25_101365 | Not Available | Negative | 423947 - 424291 | 13080.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
