Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase/carboxylesterase | C8N25_101243 | Not Available | Positive | 278117 - 278725 | 22026.5 |
| hypothetical protein | C8N25_101244 | Not Available | Negative | 278869 - 279030 | 6058.68 |
| hypothetical protein | C8N25_101245 | Not Available | Positive | 279162 - 280358 | 45541.6 |
| exonuclease sbcc | C8N25_101246 | Not Available | Negative | 280496 - 283525 | 115979.0 |
| exodeoxyribonuclease i subunit d | C8N25_101247 | Not Available | Negative | 283522 - 284751 | 46580.3 |
| rare lipoprotein a | C8N25_101248 | Not Available | Positive | 284992 - 285513 | 19697.6 |
| rnd family efflux transporter mfp subunit | C8N25_101249 | Not Available | Positive | 285595 - 286665 | 39000.5 |
| multidrug efflux pump subunit acrb | C8N25_101250 | Not Available | Positive | 286669 - 289713 | 112004.0 |
| multidrug efflux pump subunit acrb | C8N25_101251 | Not Available | Positive | 289715 - 292921 | 121575.0 |
| hypothetical protein | C8N25_101252 | Not Available | Positive | 293072 - 293374 | 11042.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
