Algoriphagus antarcticus str. DSM 15986

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus antarcticus strain DSM 15986 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 16.0 °C and requires aerobic conditions for its metabolism. This psychrotolerant organism is adapted to cold environments, which aligns with its designation reflecting Antarctic origins. The Gram-negative cell wall structure suggests the presence of an outer membrane, which may confer specific advantages in its native habitat, such as resistance to certain environmental stresses. The aerobic nature of A. antarcticus indicates its reliance on oxygen for energy production, potentially involving respiratory pathways that are efficient at lower temperatures. This trait may enable it to occupy niche environments where oxygen is available, but temperatures remain significantly below the optimal growth conditions for many other microbial species. Research into the metabolic capabilities of A. antarcticus could reveal insights into its ecological role in Antarctic ecosystems, particularly in nutrient cycling and interactions with other microorganisms. Understanding the adaptive mechanisms of such cold-adapted microbes might also contribute to broader knowledge regarding microbial life in extreme environments, including their potential applications in biotechnology or bioremediation in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus antarcticus
StrainDSM 15986

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmicrobial mats in Antarctic lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus antarcticus strain DSM 15986 Ga0196854_179, whole

Gene Summary

Adenine Count

1757509 bp

Thymine Count

1772544 bp

Guanine Count

1208394 bp

Cytosine Count

1182642 bp

Genome Length

5923881 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive1290 - 1397Not Available
hypothetical proteinC8N25_1014Not AvailablePositive1500 - 204821596.5
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive1999 - 2078Not Available
hypothetical proteinC8N25_1015Not AvailablePositive2351 - 26209985.03
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive2763 - 2845Not Available
carboxypeptidase-like proteinC8N25_1016Not AvailablePositive2995 - 411042687.8
signal transduction histidine kinaseC8N25_1017Not AvailableNegative4146 - 654590799.5
3-hydroxybutyryl-coa dehydrogenaseC8N25_1018Not AvailableNegative6621 - 749932543.0
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8N25_1019Not AvailableNegative7526 - 829327025.9
nadph:quinone reductase-like zn-dependent oxidoreductaseC8N25_10110Not AvailablePositive8555 - 953535415.9

Displaying genes 11 – 20 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.