Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 1290 - 1397 | Not Available |
| hypothetical protein | C8N25_1014 | Not Available | Positive | 1500 - 2048 | 21596.5 |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 1999 - 2078 | Not Available |
| hypothetical protein | C8N25_1015 | Not Available | Positive | 2351 - 2620 | 9985.03 |
| Ncrna_class:autocatalytically_spliced_intron | Not Available | Not Available | Positive | 2763 - 2845 | Not Available |
| carboxypeptidase-like protein | C8N25_1016 | Not Available | Positive | 2995 - 4110 | 42687.8 |
| signal transduction histidine kinase | C8N25_1017 | Not Available | Negative | 4146 - 6545 | 90799.5 |
| 3-hydroxybutyryl-coa dehydrogenase | C8N25_1018 | Not Available | Negative | 6621 - 7499 | 32543.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | C8N25_1019 | Not Available | Negative | 7526 - 8293 | 27025.9 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | C8N25_10110 | Not Available | Positive | 8555 - 9535 | 35415.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
