Algoriphagus antarcticus str. DSM 15986

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus antarcticus strain DSM 15986 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 16.0 °C and requires aerobic conditions for its metabolism. This psychrotolerant organism is adapted to cold environments, which aligns with its designation reflecting Antarctic origins. The Gram-negative cell wall structure suggests the presence of an outer membrane, which may confer specific advantages in its native habitat, such as resistance to certain environmental stresses. The aerobic nature of A. antarcticus indicates its reliance on oxygen for energy production, potentially involving respiratory pathways that are efficient at lower temperatures. This trait may enable it to occupy niche environments where oxygen is available, but temperatures remain significantly below the optimal growth conditions for many other microbial species. Research into the metabolic capabilities of A. antarcticus could reveal insights into its ecological role in Antarctic ecosystems, particularly in nutrient cycling and interactions with other microorganisms. Understanding the adaptive mechanisms of such cold-adapted microbes might also contribute to broader knowledge regarding microbial life in extreme environments, including their potential applications in biotechnology or bioremediation in cold climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus antarcticus
StrainDSM 15986

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmicrobial mats in Antarctic lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus antarcticus strain DSM 15986 Ga0196854_179, whole

Gene Summary

Adenine Count

1757509 bp

Thymine Count

1772544 bp

Guanine Count

1208394 bp

Cytosine Count

1182642 bp

Genome Length

5923881 bp

Protein-coding Genes

5063 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fkbp-type peptidyl-prolyl cis-trans isomeraseC8N25_103153Not AvailablePositive1184034 - 118495733342.7
fkbp-type peptidyl-prolyl cis-trans isomerase fklbC8N25_103154Not AvailablePositive1185005 - 118556520334.4
fkbp-type peptidyl-prolyl cis-trans isomerase fkpaC8N25_103155Not AvailablePositive1185567 - 118612420646.4
hypothetical proteinC8N25_103156Not AvailableNegative1186369 - 118667111157.9
lsu ribosomal protein l19pC8N25_103157Not AvailableNegative1186837 - 118720213953.1
trna (guanine37-n(1)-) methyltransferaseC8N25_103158Not AvailableNegative1187253 - 118796926389.6
16s rrna processing protein rimmC8N25_103159Not AvailableNegative1187973 - 118850320259.5
small subunit ribosomal protein s16C8N25_103160Not AvailableNegative1188515 - 118937230298.4
Trna-argNot AvailableNot AvailablePositive1189701 - 1189775Not Available
laci family transcriptional regulatorC8N25_103162Not AvailablePositive1189912 - 119094037984.5

Displaying genes 1021 – 1030 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.