Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. dendropanacis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181802 bp
Thymine Count
1188602 bp
Guanine Count
1644862 bp
Cytosine Count
1646950 bp
Genome Length
5666765 bp
Protein-coding Genes
5168 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hrp/hrc protein | ALO71_03241 | Not Available | Negative | 2248601 - 2249575 | 35350.2 |
| type iii secretion component protein hrcv | ALO71_03242 | P35655 | Negative | 2249609 - 2251696 | 76606.0 |
| type iii secretion component protein hrcj | ALO71_03243 | Q05395 | Negative | 2251693 - 2252799 | 40576.3 |
| rna polymerase sigma factor | ALO71_03244 | P37929 | Positive | 2253043 - 2253597 | 21195.3 |
| type iii helper protein hrpk | ALO71_03245 | P41501 | Positive | 2253671 - 2255977 | 79970.2 |
| type iii chaperone protein scha | ALO71_03246 | Not Available | Positive | 2256124 - 2256504 | 13999.2 |
| type iii effector hopa1 | ALO71_102231 | Q08370 | Positive | 2256518 - 2257132 | 22694.9 |
| unknown protein sequence | ALO71_05200 | Not Available | Negative | 2257048 - 2259066 | 74998.1 |
| uncharacterized protein | ALO71_03248 | Not Available | Positive | 2260709 - 2261257 | 21076.1 |
| prolipoprotein diacylglyceryl transferase | ALO71_01647 | Q48CC8 | Positive | 2262927 - 2263739 | 30116.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
