Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. dendropanacis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181802 bp
Thymine Count
1188602 bp
Guanine Count
1644862 bp
Cytosine Count
1646950 bp
Genome Length
5666765 bp
Protein-coding Genes
5168 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system transcriptional regulator | ALO71_03223 | P26316 | Positive | 2233119 - 2234027 | 33270.3 |
| type iii secretion system helper protein hrpa2 | ALO71_100300 | Q52480 | Positive | 2234074 - 2234445 | 12897.1 |
| harpin protein hrpz | ALO71_03224 | Q52481 | Positive | 2234496 - 2235542 | 35435.4 |
| type iii secretion component protein hrpb | ALO71_03225 | Not Available | Positive | 2235570 - 2235944 | 12866.3 |
| type iii secretion component protein hrcj | ALO71_03226 | Q01251 | Positive | 2235953 - 2236759 | 29252.6 |
| type iii secretion component protein hrcj | ALO71_03227 | Not Available | Positive | 2236759 - 2237286 | 20200.1 |
| putative hrp/hrc protein | ALO71_03228 | Not Available | Positive | 2237265 - 2237903 | 23580.0 |
| hrpg | ALO71_100313 | Not Available | Positive | 2238189 - 2238629 | 15829.8 |
| putative hrp/hrc protein | ALO71_04958 | Q01723 | Positive | 2238607 - 2240730 | 77408.6 |
| type iii negative regulator of hrp expression hrpv | ALO71_03230 | Not Available | Positive | 2240933 - 2241280 | 13360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
