Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. dendropanacis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181802 bp
Thymine Count
1188602 bp
Guanine Count
1644862 bp
Cytosine Count
1646950 bp
Genome Length
5666765 bp
Protein-coding Genes
5168 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO71_102096 | Not Available | Negative | 2217587 - 2217892 | 10998.1 |
| type iii effector hopaa1-1 | ALO71_03214 | Not Available | Positive | 2217891 - 2218460 | 20367.0 |
| type iii effector hopaa1-1 | ALO71_03215 | Not Available | Positive | 2218477 - 2219352 | 29796.3 |
| type iii helper protein hrpw1 | ALO71_04953 | D3JTC1 | Negative | 2219439 - 2220689 | 43234.2 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | ALO71_03217 | Not Available | Positive | 2220993 - 2221487 | 18162.5 |
| effector protein hopm1 | ALO71_03218 | Q887D0 | Positive | 2221696 - 2223717 | 71164.9 |
| avirulence protein avrf | ALO71_03219 | Not Available | Positive | 2223795 - 2224184 | 14339.1 |
| type iii effector | ALO71_04956 | Not Available | Negative | 2224240 - 2229429 | 188017.0 |
| hrp-associated lytic transglycosylase | ALO71_03221 | P0AEZ8 | Positive | 2229603 - 2231066 | 53492.0 |
| type iii transcriptional regulator hrpr | ALO71_03222 | P37930 | Positive | 2232148 - 2233068 | 34315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
