Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. dendropanacis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181802 bp
Thymine Count
1188602 bp
Guanine Count
1644862 bp
Cytosine Count
1646950 bp
Genome Length
5666765 bp
Protein-coding Genes
5168 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose import atp-binding protein xylg | ALO71_00335 | Q48J74 | Negative | 2067642 - 2067860 | 7674.31 |
| xylose abc transporter, periplasmic xylose-binding protein xylf | ALO71_00336 | P37387 | Negative | 2068037 - 2068960 | 33010.9 |
| xylose isomerase | ALO71_00337 | Q48J73 | Negative | 2069100 - 2070416 | 49153.7 |
| xylose activator xylr | ALO71_00338 | P0ACI5 | Positive | 2070599 - 2071798 | 43702.7 |
| papain cysteine protease family protein | ALO71_04282 | Q5UQE9 | Negative | 2071804 - 2072655 | 32152.5 |
| o-methyltransferase involved in polyketide biosynthesi | ALO71_102473 | Not Available | Positive | 2073627 - 2073740 | 4184.1 |
| virk protein | ALO71_00340 | P55686 | Negative | 2073744 - 2074175 | 15089.9 |
| methyl-accepting chemotaxis protein | ALO71_00341 | Not Available | Positive | 2074377 - 2076011 | 58281.2 |
| hypothetical protein | ALO71_102647 | Not Available | Negative | 2076008 - 2076247 | 8429.14 |
| ribose abc transporter periplasmic ribose-binding protein | ALO71_00342 | Not Available | Positive | 2076228 - 2077232 | 35896.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
