Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. dendropanacis |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181802 bp
Thymine Count
1188602 bp
Guanine Count
1644862 bp
Cytosine Count
1646950 bp
Genome Length
5666765 bp
Protein-coding Genes
5168 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-box domain-containing protein | ALO71_00649 | Not Available | Positive | 1317481 - 1318572 | 39861.8 |
| decarboxylase, ornithine/dap/arginine decarboxylase family 2 | ALO71_00650 | P27121 | Positive | 1318953 - 1320116 | 43318.0 |
| putative 3-methyladenine dna glycosylase | ALO71_04098 | Q48DL2 | Positive | 1320477 - 1321148 | 24990.9 |
| pap2 superfamily protein/deda family protein | ALO71_04099 | P30149 | Positive | 1321152 - 1322468 | 47039.9 |
| putative trans membrane protein | ALO71_100341 | Not Available | Positive | 1322576 - 1324639 | 69506.9 |
| sensory box histidine kinase | ALO71_05164 | Q9HWA7 | Negative | 1324636 - 1327464 | 105807.0 |
| type iia topoisomerase, a subunit | ALO71_04101 | Not Available | Negative | 1327394 - 1327849 | 16227.9 |
| type iv leader peptidase family | ALO71_04102 | Not Available | Positive | 1327922 - 1328383 | 16416.6 |
| luxr family dna binding response regulator | ALO71_04103 | Q9HWA4 | Positive | 1328554 - 1329342 | 29254.3 |
| putative two-component response regulator | ALO71_04104 | Q9A5I5 | Negative | 1329350 - 1331005 | 62127.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
