Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces cerinus |
| Strain | subsp. cerinus |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
630163 bp
Thymine Count
627382 bp
Guanine Count
1467315 bp
Cytosine Count
1462649 bp
Genome Length
4187509 bp
Protein-coding Genes
3874 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05443544_2101 | Not Available | Negative | 2232575 - 2233243 | 22362.1 |
| cytochrome c biogenesis protein ccda | SAMN05443544_2102 | Not Available | Positive | 2233411 - 2235123 | 60220.0 |
| rna polymerase, sigma subunit, ecf family | SAMN05443544_2103 | Not Available | Positive | 2235120 - 2235785 | 24225.8 |
| anti-sigma-k factor rska | SAMN05443544_2104 | Not Available | Positive | 2235782 - 2236678 | 30714.3 |
| probable f420-dependent oxidoreductase, rv3520c family | SAMN05443544_2105 | Not Available | Positive | 2236780 - 2237820 | 36854.6 |
| hypothetical protein | SAMN05443544_2106 | Not Available | Positive | 2237988 - 2238170 | 6397.33 |
| hypothetical protein | SAMN05443544_2107 | Not Available | Positive | 2238700 - 2239221 | 19502.2 |
| hypothetical protein | SAMN05443544_2108 | Not Available | Negative | 2239222 - 2240337 | 37200.9 |
| integral membrane protein, interacts with ftsh | SAMN05443544_2109 | Not Available | Negative | 2240489 - 2241652 | 38863.4 |
| signal transduction histidine kinase | SAMN05443544_2110 | Not Available | Positive | 2241784 - 2243043 | 43791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.