Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | YSA_RS04440 | Not Available | Positive | 818529 - 818858 | 12216.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | YSA_RS04445 | Not Available | Positive | 819003 - 820334 | 49941.5 |
| response regulator transcription factor | YSA_RS04450 | Not Available | Positive | 820617 - 821234 | 22967.3 |
| atp-binding protein | YSA_RS04455 | Not Available | Positive | 821243 - 824875 | 133158.0 |
| yggl family protein | YSA_RS04460 | Not Available | Positive | 824917 - 825261 | 12917.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | YSA_RS04465 | Not Available | Positive | 825462 - 826916 | 52251.0 |
| t6ss effector bth_i2691 family protein | YSA_RS04470 | Not Available | Negative | 827044 - 829432 | 82906.3 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | YSA_RS04475 | Not Available | Negative | 829527 - 831719 | 82334.3 |
| ribosome modulation factor | YSA_RS04480 | Not Available | Positive | 832282 - 832497 | 8160.62 |
| quinone-dependent dihydroorotate dehydrogenase | YSA_RS04485 | Not Available | Negative | 832661 - 833683 | 35638.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






