Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | YSA_RS04390 | Not Available | Negative | 808070 - 809134 | 40075.6 |
| aconitate hydratase acna | YSA_RS04395 | Not Available | Positive | 809359 - 812100 | 99210.7 |
| methyl-accepting chemotaxis protein | YSA_RS04400 | Not Available | Positive | 812351 - 813916 | 57073.5 |
| pseudouridine synthase | YSA_RS04405 | Not Available | Negative | 814150 - 815034 | 34069.8 |
| hypothetical protein | YSA_RS04410 | Not Available | Negative | 815086 - 815394 | 11606.0 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | YSA_RS04415 | Not Available | Negative | 815460 - 815891 | 15917.1 |
| glutaredoxin family protein | YSA_RS04420 | Not Available | Negative | 816000 - 816239 | 8837.84 |
| ammonium transporter | YSA_RS04425 | Not Available | Negative | 816313 - 817521 | 42291.2 |
| duf883 family protein | YSA_RS04430 | Not Available | Positive | 817834 - 818148 | 11400.5 |
| phage holin family protein | YSA_RS04435 | Not Available | Positive | 818158 - 818532 | 13263.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






