Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | YSA_RS03330 | Not Available | Negative | 586922 - 587230 | 11124.1 |
| patatin-like phospholipase family protein | YSA_RS03335 | Not Available | Positive | 587450 - 588529 | 39560.9 |
| 6-carboxytetrahydropterin synthase qued | YSA_RS03340 | Not Available | Positive | 588583 - 588939 | 13534.1 |
| hypothetical protein | YSA_RS03345 | Not Available | Negative | 588966 - 589727 | 29203.7 |
| duf1289 domain-containing protein | YSA_RS03350 | Not Available | Negative | 589795 - 590262 | 18417.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | YSA_RS03355 | Not Available | Positive | 590668 - 593277 | 93615.3 |
| 2-methylcitrate dehydratase | YSA_RS03360 | Not Available | Negative | 593352 - 594836 | 54948.9 |
| 2-methylaconitate cis-trans isomerase prpf | YSA_RS03365 | Not Available | Negative | 595008 - 596198 | 41343.4 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | YSA_RS03370 | Not Available | Negative | 596350 - 598938 | 94001.3 |
| 2-methylcitrate synthase | YSA_RS03375 | Not Available | Negative | 599100 - 600227 | 41997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






