Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | YSA_RS14380 | Not Available | Negative | 2973934 - 2975340 | 50989.3 |
| sensor histidine kinase | YSA_RS14385 | Not Available | Negative | 2975337 - 2977151 | 67434.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | YSA_RS14390 | Not Available | Negative | 2977194 - 2977739 | 20375.3 |
| agmatine deiminase | YSA_RS14395 | Not Available | Positive | 2978018 - 2979124 | 40768.9 |
| hypothetical protein | YSA_RS30315 | Not Available | Positive | 2979319 - 2979516 | 7319.96 |
| tonb-dependent receptor | YSA_RS14405 | Not Available | Negative | 2979583 - 2981652 | 76527.8 |
| oprd family porin | YSA_RS14410 | Not Available | Positive | 2982127 - 2983446 | 47789.4 |
| fmn-binding glutamate synthase family protein | YSA_RS14415 | Not Available | Negative | 2983598 - 2985268 | 60586.9 |
| atp-binding protein | YSA_RS14420 | Not Available | Negative | 2985514 - 2986881 | 50466.6 |
| response regulator | YSA_RS14425 | Not Available | Negative | 2986883 - 2987602 | 26571.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






