Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter substrate-binding protein | YSA_RS13405 | Not Available | Negative | 2763308 - 2764231 | 33538.2 |
| choline-sulfatase | YSA_RS13410 | Not Available | Negative | 2764246 - 2765763 | 57416.2 |
| choline sulfate utilization transcriptional regulator | YSA_RS13415 | Not Available | Positive | 2765872 - 2766771 | 33374.1 |
| nad(p)h-binding protein | YSA_RS13420 | Not Available | Negative | 2766893 - 2767510 | 22105.7 |
| dopa 4,5-dioxygenase family protein | YSA_RS13425 | Not Available | Positive | 2767563 - 2767895 | 12425.1 |
| tryptophan synthase subunit alpha | YSA_RS13430 | Not Available | Negative | 2768016 - 2768825 | 28369.0 |
| tryptophan synthase subunit beta | YSA_RS13435 | Not Available | Negative | 2768822 - 2770039 | 44058.8 |
| lysr family transcriptional regulator | YSA_RS13440 | Not Available | Positive | 2770150 - 2771046 | 32166.6 |
| duf883 family protein | YSA_RS13445 | Not Available | Negative | 2771043 - 2771366 | 11968.2 |
| dodecin | YSA_RS13450 | Not Available | Positive | 2771517 - 2771732 | 7959.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






