Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | ND6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162367 bp
Thymine Count
1163941 bp
Guanine Count
1883607 bp
Cytosine Count
1875534 bp
Genome Length
6085449 bp
Protein-coding Genes
5348 genes
Non-Coding Genes
232 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | YSA_RS12320 | Not Available | Negative | 2538339 - 2540198 | 68354.4 |
| c-type cytochrome | YSA_RS12325 | Not Available | Negative | 2540426 - 2540830 | 13472.3 |
| cupin domain-containing protein | YSA_RS12330 | Not Available | Negative | 2540985 - 2541533 | 20066.1 |
| alanine racemase | YSA_RS12335 | Not Available | Negative | 2541641 - 2542714 | 38692.9 |
| d-amino acid dehydrogenase | YSA_RS12345 | Not Available | Negative | 2542859 - 2544163 | 47371.9 |
| lrp/asnc ligand binding domain-containing protein | YSA_RS12350 | Not Available | Positive | 2544320 - 2544808 | 18769.0 |
| ykgj family cysteine cluster protein | YSA_RS12355 | Not Available | Negative | 2544811 - 2545164 | 13129.9 |
| nad(p)/fad-dependent oxidoreductase | YSA_RS12360 | Not Available | Positive | 2545309 - 2546601 | 46640.1 |
| duf1127 domain-containing protein | YSA_RS12365 | Not Available | Negative | 2546802 - 2547032 | 8828.68 |
| plp-dependent aminotransferase family protein | YSA_RS12370 | Not Available | Positive | 2547211 - 2548641 | 52854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






