Algoriphagus halophilus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus halophilus is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions, with an optimal growth temperature of 37.0°C. This species is characterized by its non-spore-forming nature, which indicates a reliance on vegetative growth for survival and reproduction. The morphological and physiological traits of A. halophilus suggest adaptations to specific environmental niches, particularly those with saline conditions, as implied by its genus name, Algoriphagus. The ability to grow optimally at 37.0°C aligns with the thermal preferences of many microorganisms found in warm, nutrient-rich environments. While the specific ecological role of A. halophilus is not detailed in the provided traits, its aerobic nature suggests a potential involvement in the degradation of organic matter in oxygenated habitats. This could indicate a role in biogeochemical cycling, particularly in saline ecosystems where organic materials are abundant. Furthermore, the non-spore-forming trait of A. halophilus may reflect a strategy for maintaining metabolic activity in stable environments, as opposed to forming spores for survival in fluctuating conditions. Understanding the growth characteristics and ecological roles of A. halophilus can provide insights into the dynamics of microbial communities in saline environments, contributing to a broader understanding of microbial ecology and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus halophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus halophilus strain DSM 15292 genome assembly, contig:

Gene Summary

Adenine Count

1505717 bp

Thymine Count

1513001 bp

Guanine Count

987789 bp

Cytosine Count

971672 bp

Genome Length

4978503 bp

Protein-coding Genes

4134 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoisovalerate dehydrogenase e1 componentSAMN05444394_4187Not AvailableNegative4917866 - 491988175038.0
hypothetical proteinSAMN05444394_4188Not AvailablePositive4920246 - 492134041894.4
ssu ribosomal protein s12p methylthiotransferaseSAMN05444394_4189Not AvailablePositive4921506 - 492281949921.6
antitoxin component ywqk of the ywqjk toxin-antitoxin moduleSAMN05444394_4190Not AvailablePositive4923027 - 492428347231.9
hypothetical proteinSAMN05444394_4191Not AvailablePositive4924557 - 492572045767.5
sugar or nucleoside kinase, ribokinase familySAMN05444394_4192Not AvailablePositive4925818 - 492681336513.3
predicted zn-dependent peptidaseSAMN05444394_4193Not AvailablePositive4927037 - 492836550520.1
predicted zn-dependent peptidaseSAMN05444394_4194Not AvailablePositive4928393 - 493043874880.1
predicted metalloprotease, contains c-terminal pdz domainSAMN05444394_4195Not AvailableNegative4930478 - 493211863551.5
lsu ribosomal protein l34pSAMN05444394_4196Not AvailablePositive4932255 - 49324136207.72

Displaying genes 4161 – 4170 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.