Phaeobacter inhibens str. S4Sm

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter inhibens
StrainS4Sm

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatproduction sites
Biotic relationshipmutualistic symbioses
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitymarine algae

Genome Summary

Phaeobacter inhibens strain S4Sm contig_80, whole genome shotgun

Gene Summary

Adenine Count

876652 bp

Thymine Count

888335 bp

Guanine Count

1326105 bp

Cytosine Count

1304260 bp

Genome Length

4403494 bp

Protein-coding Genes

4060 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal rna small subunit methyltransferase hAT574_10450Not AvailablePositive2169942 - 217094936635.8
cell division protein ftslAT574_10455Not AvailablePositive2170946 - 217132014049.8
cell division protein ftsiAT574_10460Not AvailablePositive2171317 - 217310463853.1
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseAT574_10465Not AvailablePositive2173120 - 217460451524.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseAT574_10470Not AvailablePositive2174601 - 217601348574.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseAT574_10475Not AvailablePositive2176041 - 217712338632.2
glutaminase aAT574_10480Not AvailableNegative2177455 - 217836932801.8
udp-n-acetylmuramoylalanine--d-glutamate ligaseAT574_10485Not AvailablePositive2178494 - 217989149294.4
marr family transcriptional regulatorAT574_10490Not AvailableNegative2179895 - 218033816715.3
antibiotic biosynthesis monooxygenaseAT574_10495Not AvailableNegative2180343 - 218063611034.2

Displaying genes 1981 – 1990 of 4060 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

20 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002319Cu(+)CuChemical structure of Cu(+)7440-50-8
Average63.546Da
Monoisotopic62.92960108Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–10 of 20 metabolites

Health Effects

No health effects information available for this bacterium.