Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase quee | PhaeoP88_RS02765 | Not Available | Positive | 604715 - 605512 | 29120.5 |
| preq(1) synthase | PhaeoP88_RS02770 | Not Available | Positive | 605538 - 606002 | 17292.6 |
| pas domain-containing protein | PhaeoP88_RS02775 | Not Available | Negative | 606040 - 606711 | 25116.9 |
| trna pseudouridine(38-40) synthase trua | PhaeoP88_RS02780 | Not Available | Negative | 606866 - 607639 | 28425.6 |
| ycjx family protein | PhaeoP88_RS02785 | Not Available | Positive | 607785 - 609200 | 51498.6 |
| gnat family n-acetyltransferase | PhaeoP88_RS02790 | Not Available | Positive | 609197 - 609751 | 19939.5 |
| ycjf family protein | PhaeoP88_RS02795 | Not Available | Positive | 609748 - 610803 | 37096.3 |
| group iii truncated hemoglobin | PhaeoP88_RS02800 | Not Available | Negative | 610898 - 611308 | 15584.8 |
| pentapeptide repeat-containing protein | PhaeoP88_RS02805 | Not Available | Negative | 611406 - 612971 | 58688.0 |
| isoleucine--trna ligase | PhaeoP88_RS02810 | Not Available | Positive | 613227 - 616205 | 111708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.