Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cisplatin damage response atp-dependent dna ligase | PhaeoP88_RS18725 | Not Available | Negative | 58241 - 59797 | 57799.4 |
| ligase-associated dna damage response exonuclease | PhaeoP88_RS18730 | Not Available | Negative | 59797 - 60810 | 37212.3 |
| mate family efflux transporter | PhaeoP88_RS18735 | Not Available | Positive | 61004 - 62338 | 45382.9 |
| dna topoisomerase ib | PhaeoP88_RS18740 | Not Available | Negative | 62350 - 63327 | 36042.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | PhaeoP88_RS18745 | Not Available | Negative | 63402 - 64781 | 49223.4 |
| putative dna modification/repair radical sam protein | PhaeoP88_RS18750 | Not Available | Positive | 64960 - 66195 | 46023.4 |
| udgx family uracil-dna binding protein | PhaeoP88_RS18755 | Not Available | Positive | 66195 - 67640 | 53849.8 |
| hypothetical protein | PhaeoP88_RS18760 | Not Available | Negative | 67668 - 67925 | 8662.28 |
| polysaccharide biosynthesis/export family protein | PhaeoP88_RS18765 | Not Available | Negative | 67952 - 69325 | 49336.4 |
| yjbf family lipoprotein | PhaeoP88_RS18770 | Not Available | Negative | 69360 - 70019 | 24383.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.