Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | PhaeoP88_RS01085 | Not Available | Negative | 242886 - 244001 | 39475.6 |
| heavy metal translocating p-type atpase | PhaeoP88_RS01090 | Not Available | Positive | 244332 - 246848 | 86748.6 |
| cu(i)-responsive transcriptional regulator | PhaeoP88_RS01095 | Not Available | Positive | 246845 - 247249 | 14886.7 |
| 3-keto-5-aminohexanoate cleavage protein | PhaeoP88_RS01100 | Not Available | Negative | 247551 - 248387 | 30367.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | PhaeoP88_RS01105 | Not Available | Negative | 248399 - 249043 | 23810.9 |
| protocatechuate 3,4-dioxygenase subunit beta | PhaeoP88_RS01110 | Not Available | Negative | 249043 - 249768 | 26971.0 |
| 4-carboxymuconolactone decarboxylase | PhaeoP88_RS01115 | Not Available | Negative | 249755 - 250180 | 15193.8 |
| pca operon transcription factor pcaq | PhaeoP88_RS01120 | Not Available | Positive | 250267 - 251184 | 33152.4 |
| branched-chain amino acid abc transporter permease | PhaeoP88_RS01125 | Not Available | Positive | 251422 - 252297 | 30537.3 |
| branched-chain amino acid abc transporter permease | PhaeoP88_RS01130 | Not Available | Positive | 252302 - 253387 | 39431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.