Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | PhaeoP88_RS00980 | Not Available | Positive | 214274 - 215470 | 44923.4 |
| gdp-mannose 4,6-dehydratase | PhaeoP88_RS00985 | Not Available | Positive | 215521 - 216639 | 42185.2 |
| fascin domain-containing protein | PhaeoP88_RS00990 | Not Available | Negative | 216731 - 217237 | 17833.9 |
| mechanosensitive ion channel family protein | PhaeoP88_RS00995 | Not Available | Negative | 217407 - 218297 | 32611.7 |
| formate/nitrite transporter family protein | PhaeoP88_RS01000 | Not Available | Positive | 218410 - 219249 | 30497.7 |
| dihydrolipoyl dehydrogenase family protein | PhaeoP88_RS01010 | Not Available | Negative | 219633 - 220961 | 46013.8 |
| yihy/virulence factor brkb family protein | PhaeoP88_RS01015 | Not Available | Positive | 221324 - 222181 | 29621.0 |
| mfs transporter | PhaeoP88_RS01020 | Not Available | Negative | 222214 - 223485 | 43519.3 |
| helix-turn-helix domain-containing protein | PhaeoP88_RS01025 | Not Available | Negative | 223575 - 223979 | 14774.9 |
| mfs transporter | PhaeoP88_RS01030 | Not Available | Positive | 224059 - 225300 | 43825.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.