Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Phaeobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Phaeobacter |
| Species | Phaeobacter inhibens |
| Strain | P88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | production sites |
| Biotic relationship | mutualistic symbioses |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | marine algae |
Genome Summary
Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence.
Gene Summary
Adenine Count
46774 bp
Thymine Count
47427 bp
Guanine Count
67930 bp
Cytosine Count
64799 bp
Genome Length
226930 bp
Protein-coding Genes
204 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter permease | PhaeoP88_RS00230 | Not Available | Positive | 47506 - 49023 | 53608.4 |
| aldehyde dehydrogenase family protein | PhaeoP88_RS00235 | Not Available | Positive | 49029 - 50513 | 51846.6 |
| tm-1-like atp-binding domain-containing protein | PhaeoP88_RS00240 | Not Available | Positive | 50523 - 51782 | 44126.8 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | PhaeoP88_RS00245 | Not Available | Positive | 51846 - 52235 | 14230.0 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | PhaeoP88_RS00250 | Not Available | Positive | 52232 - 53743 | 54623.0 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | PhaeoP88_RS00255 | Not Available | Positive | 53743 - 54726 | 37632.5 |
| fumarylacetoacetate hydrolase family protein | PhaeoP88_RS00260 | Not Available | Positive | 54723 - 55577 | 31384.3 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | PhaeoP88_RS00265 | Not Available | Positive | 55574 - 56374 | 28580.0 |
| hint domain-containing protein | PhaeoP88_RS00270 | Not Available | Negative | 56470 - 57459 | 35383.6 |
| hypothetical protein | PhaeoP88_RS00275 | Not Available | Negative | 57464 - 57688 | 7838.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.