Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase cobd | PFL_RS22465 | Not Available | Negative | 5136645 - 5137637 | 36976.4 |
| adenosylcobinamide-phosphate synthase cbib | PFL_RS22470 | Not Available | Negative | 5137630 - 5138538 | 32883.6 |
| 5,6-dimethylbenzimidazole synthase | PFL_RS22475 | Not Available | Negative | 5138535 - 5139185 | 24127.2 |
| cobyrinate a,c-diamide synthase | PFL_RS22480 | Not Available | Negative | 5139178 - 5140518 | 47299.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PFL_RS22485 | Not Available | Negative | 5140529 - 5141140 | 22441.1 |
| hypothetical protein | PFL_RS22490 | Not Available | Positive | 5141626 - 5142207 | 22349.4 |
| sorbosone dehydrogenase family protein | PFL_RS22495 | Not Available | Positive | 5142278 - 5143597 | 46555.0 |
| class i sam-dependent methyltransferase | PFL_RS22500 | Not Available | Negative | 5143600 - 5144262 | 24283.3 |
| c40 family peptidase | PFL_RS22505 | Not Available | Negative | 5144284 - 5144817 | 18686.3 |
| c40 family peptidase | PFL_RS22510 | Not Available | Negative | 5144982 - 5145602 | 22572.0 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







