Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | PFL_RS21875 | Not Available | Negative | 5008893 - 5009582 | 24800.7 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | PFL_RS21880 | Not Available | Negative | 5009579 - 5011786 | 78185.5 |
| histidinol-phosphate transaminase | PFL_RS21885 | Not Available | Negative | 5011815 - 5012927 | 39895.8 |
| prephenate dehydratase | PFL_RS21890 | Not Available | Negative | 5012938 - 5014032 | 40331.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | PFL_RS21895 | Not Available | Negative | 5014032 - 5015117 | 39792.3 |
| dna gyrase subunit a | PFL_RS21900 | Not Available | Negative | 5015182 - 5017851 | 98377.0 |
| s-methyl-5-thioribose-1-phosphate isomerase | PFL_RS21905 | Not Available | Negative | 5018206 - 5019282 | 38485.1 |
| trz/atz family hydrolase | PFL_RS21910 | Not Available | Positive | 5019392 - 5020723 | 48352.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PFL_RS21915 | Not Available | Positive | 5020786 - 5021484 | 25967.4 |
| n-acetylmuramic acid 6-phosphate phosphatase mupp | PFL_RS21920 | Not Available | Positive | 5021488 - 5022159 | 24627.7 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







