Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PFL_RS20450 | Not Available | Positive | 4643778 - 4644773 | 36288.3 |
| oligopeptide/dipeptide abc transporter atp-binding protein | PFL_RS20455 | Not Available | Positive | 4644770 - 4645741 | 35572.9 |
| nudix hydrolase | PFL_RS20460 | Not Available | Positive | 4645843 - 4646466 | 23453.7 |
| hypothetical protein | PFL_RS20465 | Not Available | Positive | 4646553 - 4646927 | 13822.5 |
| helix-turn-helix transcriptional regulator | PFL_RS20470 | Not Available | Positive | 4646924 - 4647121 | 7495.84 |
| cytosine permease | PFL_RS20475 | Not Available | Positive | 4647294 - 4648565 | 45122.1 |
| cytosine deaminase | PFL_RS20480 | Not Available | Positive | 4648736 - 4649992 | 46317.3 |
| diaminopimelate epimerase | PFL_RS20485 | Not Available | Negative | 4650076 - 4651065 | 34433.0 |
| cyclase family protein | PFL_RS20490 | Not Available | Negative | 4651174 - 4652172 | 35946.5 |
| lysr family transcriptional regulator | PFL_RS20495 | Not Available | Positive | 4652271 - 4653161 | 32821.8 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







