Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | PFL_RS19765 | Not Available | Positive | 4488090 - 4490315 | 80037.8 |
| nudix hydrolase | PFL_RS19770 | Not Available | Positive | 4490463 - 4490909 | 16916.0 |
| trna 2-thiouridine(34) synthase mnma | PFL_RS19775 | Not Available | Positive | 4490981 - 4492114 | 42162.1 |
| high frequency lysogenization protein hfld | PFL_RS19780 | Not Available | Positive | 4492111 - 4492734 | 23132.3 |
| adenylosuccinate lyase | PFL_RS19785 | Not Available | Positive | 4492854 - 4494224 | 50640.6 |
| cupin domain-containing protein | PFL_RS19790 | Not Available | Positive | 4494308 - 4495474 | 44017.2 |
| gnat family n-acetyltransferase | PFL_RS19795 | Not Available | Positive | 4495467 - 4495889 | 15714.8 |
| secretin n-terminal domain-containing protein | PFL_RS19800 | Not Available | Positive | 4496068 - 4496823 | 27315.2 |
| isocitrate lyase | PFL_RS19805 | Not Available | Positive | 4497339 - 4498664 | 48490.1 |
| nadh-quinone oxidoreductase subunit a | PFL_RS19810 | Not Available | Positive | 4499270 - 4499683 | 15115.8 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







