Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PFL_RS19615 | Not Available | Negative | 4460709 - 4461665 | 36253.5 |
| catechol 1,2-dioxygenase | PFL_RS19620 | Not Available | Negative | 4461802 - 4462731 | 34170.8 |
| muconolactone delta-isomerase | PFL_RS19625 | Not Available | Negative | 4462783 - 4463073 | 11181.5 |
| muconate cycloisomerase family protein | PFL_RS19630 | Not Available | Negative | 4463084 - 4464232 | 40921.5 |
| lysr family transcriptional regulator | PFL_RS19635 | Not Available | Positive | 4464358 - 4465266 | 33329.8 |
| outer membrane beta-barrel protein | PFL_RS19640 | Not Available | Negative | 4465339 - 4466091 | 27258.1 |
| rdd family protein | PFL_RS19645 | Not Available | Positive | 4466276 - 4466731 | 17157.5 |
| duf6388 family protein | PFL_RS19650 | Not Available | Positive | 4466793 - 4467128 | 12962.2 |
| yoak family protein | PFL_RS19655 | Not Available | Positive | 4467171 - 4467875 | 24681.9 |
| sdr family oxidoreductase | PFL_RS19660 | Not Available | Negative | 4467891 - 4468640 | 26012.4 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







