Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | PFL_RS18360 | Not Available | Positive | 4200341 - 4201615 | 46367.1 |
| hybrid sensor histidine kinase/response regulator | PFL_RS18365 | Not Available | Positive | 4201621 - 4204773 | 114988.0 |
| response regulator transcription factor | PFL_RS18370 | Not Available | Positive | 4204831 - 4205484 | 24195.6 |
| lrp/asnc family transcriptional regulator | PFL_RS18375 | Not Available | Negative | 4205657 - 4206157 | 18863.7 |
| histone deacetylase family protein | PFL_RS18380 | Not Available | Positive | 4206279 - 4207307 | 37527.3 |
| ornithine cyclodeaminase | PFL_RS18385 | Not Available | Positive | 4207366 - 4208427 | 38426.9 |
| amino acid permease | PFL_RS18390 | Not Available | Positive | 4208588 - 4210000 | 50918.8 |
| hypothetical protein | PFL_RS18395 | Not Available | Positive | 4210118 - 4211329 | 44759.7 |
| acetyl-coa acetyltransferase | PFL_RS18400 | Not Available | Negative | 4211352 - 4212527 | 41060.4 |
| hypothetical protein | PFL_RS18405 | Not Available | Negative | 4212637 - 4213149 | 18637.9 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







