Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-butanediol dehydrogenase | PFL_RS16980 | Not Available | Positive | 3885859 - 3886923 | 37935.9 |
| carbohydrate porin | PFL_RS16985 | Not Available | Positive | 3886980 - 3888281 | 47073.2 |
| gmc family oxidoreductase | PFL_RS16990 | Not Available | Positive | 3888317 - 3889978 | 60243.1 |
| hypothetical protein | PFL_RS16995 | Not Available | Negative | 3889890 - 3890387 | 18358.4 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | PFL_RS17000 | Not Available | Negative | 3890502 - 3891431 | 34950.9 |
| fumarylacetoacetate hydrolase family protein | PFL_RS17005 | Not Available | Positive | 3891630 - 3892289 | 23785.5 |
| fumarylacetoacetate hydrolase family protein | PFL_RS17010 | Not Available | Positive | 3892299 - 3893099 | 29762.3 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | PFL_RS17015 | Not Available | Positive | 3893100 - 3894560 | 52831.4 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | PFL_RS17020 | Not Available | Positive | 3894615 - 3895472 | 31602.6 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | PFL_RS17025 | Not Available | Positive | 3895538 - 3895927 | 14609.5 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







