Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | PFL_RS15790 | Not Available | Negative | 3594247 - 3595572 | 49708.9 |
| hypothetical protein | PFL_RS15795 | Not Available | Positive | 3595926 - 3596192 | 9729.47 |
| phosphocholine-specific phospholipase c | PFL_RS15800 | Not Available | Negative | 3596371 - 3598518 | 78517.2 |
| adenylate cyclase | PFL_RS15805 | Not Available | Negative | 3598850 - 3599818 | 34742.0 |
| phenylacetic acid degradation operon negative regulatory protein paax | PFL_RS15810 | Not Available | Negative | 3600136 - 3601059 | 35165.4 |
| phenylacetic acid degradation protein paay | PFL_RS15815 | Not Available | Negative | 3601124 - 3601717 | 21021.4 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | PFL_RS15820 | Not Available | Positive | 3602144 - 3602935 | 28277.1 |
| hydroxyphenylacetyl-coa thioesterase paai | PFL_RS15825 | Not Available | Positive | 3602963 - 3603412 | 15985.0 |
| phenylacetate--coa ligase paak | PFL_RS15830 | Not Available | Positive | 3603633 - 3604955 | 49378.6 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | PFL_RS15835 | Not Available | Positive | 3605133 - 3606122 | 37738.8 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







