Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | PFL_RS12815 | Not Available | Negative | 2809612 - 2810406 | 28255.8 |
| mfs transporter | PFL_RS12820 | Not Available | Positive | 2810615 - 2812276 | 59618.2 |
| hlyd family secretion protein | PFL_RS12825 | Not Available | Positive | 2812273 - 2813397 | 40058.0 |
| copper homeostasis membrane protein copd | PFL_RS12830 | Not Available | Negative | 2813633 - 2814508 | 31238.8 |
| copper homeostasis periplasmic binding protein copc | PFL_RS12835 | Not Available | Negative | 2814512 - 2814880 | 12806.2 |
| gnat family n-acetyltransferase | PFL_RS12840 | Not Available | Negative | 2814910 - 2815344 | 16417.4 |
| tetr/acrr family transcriptional regulator | PFL_RS12845 | Not Available | Positive | 2815609 - 2816229 | 23632.4 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | PFL_RS12850 | Not Available | Negative | 2816316 - 2817590 | 46137.3 |
| nad(p)-dependent oxidoreductase | PFL_RS12855 | Not Available | Negative | 2817591 - 2818958 | 49103.8 |
| dihydropyrimidinase | PFL_RS12860 | Not Available | Negative | 2819177 - 2820616 | 52490.1 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







