Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | PFL_RS12765 | Not Available | Negative | 2797242 - 2797757 | 19534.7 |
| branched-chain amino acid aminotransferase | PFL_RS12770 | Not Available | Negative | 2797936 - 2798955 | 36929.1 |
| dihydrolipoyl dehydrogenase | PFL_RS12775 | Not Available | Negative | 2799244 - 2800635 | 48868.3 |
| dihydrolipoamide acetyltransferase family protein | PFL_RS12780 | Not Available | Negative | 2800639 - 2801943 | 46250.9 |
| alpha-ketoacid dehydrogenase subunit beta | PFL_RS12785 | Not Available | Negative | 2801944 - 2803002 | 38524.9 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | PFL_RS12790 | Not Available | Negative | 2803004 - 2804239 | 45214.0 |
| bkd operon transcriptional regulator bkdr | PFL_RS12795 | Not Available | Positive | 2804436 - 2804924 | 18179.2 |
| hd-gyp domain-containing protein | PFL_RS12800 | Not Available | Negative | 2804928 - 2806124 | 44307.8 |
| methyl-accepting chemotaxis protein | PFL_RS12805 | Not Available | Negative | 2806242 - 2807864 | 57628.5 |
| dass family sodium-coupled anion symporter | PFL_RS12810 | Not Available | Positive | 2808112 - 2809596 | 52033.7 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







