Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase catalytic domain family protein | PFL_RS12165 | Not Available | Negative | 2676676 - 2677401 | 26726.9 |
| murein l,d-transpeptidase | PFL_RS12170 | Not Available | Positive | 2677555 - 2679126 | 58101.7 |
| amidohydrolase | PFL_RS12175 | Not Available | Negative | 2679308 - 2681188 | 67867.3 |
| hypothetical protein | PFL_RS12180 | Not Available | Positive | 2681303 - 2681674 | 13716.2 |
| duf1289 domain-containing protein | PFL_RS12185 | Not Available | Positive | 2681678 - 2681860 | 6787.58 |
| hypothetical protein | PFL_RS12190 | Not Available | Negative | 2681861 - 2682346 | 18310.5 |
| lyse family translocator | PFL_RS12195 | Not Available | Negative | 2682360 - 2683001 | 22662.0 |
| hypothetical protein | PFL_RS12200 | Not Available | Positive | 2683248 - 2683922 | 24119.7 |
| hypothetical protein | PFL_RS12205 | Not Available | Negative | 2684010 - 2684228 | 7900.01 |
| nad(p)-dependent alcohol dehydrogenase | PFL_RS12210 | Not Available | Negative | 2684425 - 2685477 | 38012.2 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







