Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation acetate symporter | PFL_RS08625 | Not Available | Positive | 1914764 - 1916422 | 58790.2 |
| citrate synthase | PFL_RS08630 | Not Available | Negative | 1916707 - 1917996 | 47702.7 |
| succinate dehydrogenase, cytochrome b556 subunit | PFL_RS08635 | Not Available | Positive | 1918347 - 1918733 | 13715.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | PFL_RS08640 | Not Available | Positive | 1918727 - 1919095 | 13612.8 |
| succinate dehydrogenase flavoprotein subunit | PFL_RS08645 | Not Available | Positive | 1919099 - 1920871 | 63599.6 |
| succinate dehydrogenase iron-sulfur subunit | PFL_RS08650 | Not Available | Positive | 1920884 - 1921588 | 26090.7 |
| 2-oxoglutarate dehydrogenase e1 component | PFL_RS08655 | Not Available | Positive | 1921852 - 1924683 | 106570.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PFL_RS08660 | Not Available | Positive | 1924726 - 1925949 | 42310.2 |
| dihydrolipoyl dehydrogenase | PFL_RS08665 | Not Available | Positive | 1926050 - 1927486 | 49877.4 |
| adp-forming succinate--coa ligase subunit beta | PFL_RS08670 | Not Available | Positive | 1927717 - 1928883 | 41341.9 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







