Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | PFL_RS07465 | Not Available | Negative | 1664911 - 1667031 | 76225.7 |
| gntr family transcriptional regulator | PFL_RS07470 | Not Available | Positive | 1667328 - 1668044 | 26513.1 |
| sdr family oxidoreductase | PFL_RS07475 | Not Available | Positive | 1668041 - 1668829 | 27816.6 |
| 3-keto-5-aminohexanoate cleavage protein | PFL_RS07480 | Not Available | Positive | 1668929 - 1669861 | 33904.7 |
| mfs transporter | PFL_RS07485 | Not Available | Positive | 1669928 - 1671262 | 47959.8 |
| lysr substrate-binding domain-containing protein | PFL_RS07490 | Not Available | Positive | 1671362 - 1672282 | 33870.0 |
| low temperature requirement protein a | PFL_RS07495 | Not Available | Positive | 1672521 - 1673708 | 43309.6 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | PFL_RS07500 | Not Available | Positive | 1673791 - 1674156 | 13278.1 |
| lysr family transcriptional regulator | PFL_RS07505 | Not Available | Negative | 1674160 - 1675098 | 35475.6 |
| dmt family transporter | PFL_RS07510 | Not Available | Negative | 1675279 - 1676187 | 32245.7 |
Pathways
1491 pathways
Health Effects
No health effects information available for this bacterium.







