Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | PFL_RS07265 | Not Available | Negative | 1618707 - 1619693 | 35193.4 |
| oprd family porin | PFL_RS07270 | Not Available | Negative | 1619773 - 1621065 | 47147.1 |
| response regulator | PFL_RS07275 | Not Available | Positive | 1621302 - 1621973 | 24568.8 |
| sensor histidine kinase | PFL_RS07280 | Not Available | Positive | 1621966 - 1623351 | 50290.4 |
| hdod domain-containing protein | PFL_RS07285 | Not Available | Negative | 1623359 - 1624180 | 30587.9 |
| folate-binding protein ygfz | PFL_RS07290 | Not Available | Negative | 1624218 - 1625159 | 33922.0 |
| succinate dehydrogenase assembly factor 2 | PFL_RS07295 | Not Available | Positive | 1625309 - 1625563 | 10391.5 |
| protein ygfx | PFL_RS07300 | Not Available | Positive | 1625547 - 1625999 | 17341.4 |
| l-aspartate oxidase | PFL_RS07305 | Not Available | Negative | 1625968 - 1627584 | 59617.9 |
| rna polymerase sigma factor rpoe | PFL_RS07310 | Not Available | Positive | 1628143 - 1628724 | 22239.3 |
Pathways
731 pathways
Health Effects
No health effects information available for this bacterium.







