Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | Pf-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa thiolase | PFL_RS06675 | Not Available | Positive | 1493174 - 1494379 | 41774.5 |
| protocatechuate 3,4-dioxygenase subunit beta | PFL_RS06680 | Not Available | Positive | 1494417 - 1495121 | 26293.9 |
| protocatechuate 3,4-dioxygenase subunit alpha | PFL_RS06685 | Not Available | Positive | 1495123 - 1495689 | 20728.4 |
| mfs family transporter | PFL_RS06690 | Not Available | Positive | 1495936 - 1497246 | 47876.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PFL_RS06695 | Not Available | Positive | 1497295 - 1498659 | 48731.1 |
| 3-oxoadipate enol-lactonase | PFL_RS06700 | Not Available | Positive | 1498671 - 1499459 | 28278.8 |
| 4-carboxymuconolactone decarboxylase | PFL_RS06705 | Not Available | Positive | 1499482 - 1499874 | 14764.6 |
| methyltransferase domain-containing protein | PFL_RS06710 | Not Available | Negative | 1499900 - 1500724 | 31494.9 |
| duf1641 domain-containing protein | PFL_RS06715 | Not Available | Negative | 1500738 - 1501127 | 14073.2 |
| fad/nad(p)-binding oxidoreductase | PFL_RS06720 | Not Available | Negative | 1501153 - 1502343 | 44324.5 |
Health Effects
No health effects information available for this bacterium.







